CDS

Accession Number TCMCG073C17488
gbkey CDS
Protein Id XP_010542078.1
Location complement(join(2472344..2472425,2472903..2473013,2473121..2473263,2473881..2474051,2474279..2475124,2475854..2475991))
Gene LOC104815393
GeneID 104815393
Organism Tarenaya hassleriana

Protein

Length 496aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA268022
db_source XM_010543776.2
Definition PREDICTED: E3 ubiquitin-protein ligase RLIM-like isoform X3 [Tarenaya hassleriana]

EGGNOG-MAPPER Annotation

COG_category O
Description RING-H2 zinc finger domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K16271        [VIEW IN KEGG]
EC 2.3.2.27        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000578        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004842        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006511        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007389        [VIEW IN EMBL-EBI]
GO:0008134        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009798        [VIEW IN EMBL-EBI]
GO:0009880        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019787        [VIEW IN EMBL-EBI]
GO:0019941        [VIEW IN EMBL-EBI]
GO:0030163        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043632        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044257        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0051603        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901565        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGCACCGGAACCAGTCGAATCGGGTCGGAACCTCCGCCGGTGCGGGTCAGCCGGAATAACCGGTCCCGCTCTCGGGCTCGTCTTTCATCTCTCCTTGTTTGCGGGTGTTCATCTTCTGACGTGCGCGATCGCGAGCAGAAGGAACATTTCATTGATGTTAGAGCAAGTTCTTCAAAGGAAATAAGACCTGTTGTGGAAATTACTTCAGAGAGAAGTAGAGGAACAGAGAGGTTAAACTCAAATACAGAAGCTGGAAGCTTGTCTCAAATCAGTGCCTCGACCTCGACCTCCAGATGTGTGTCAGTTCCCCATGGTTTGGTGGGTGCTGAAATTAGTAAAGGAGAGATGTACTTGAAGAATTATGAGGAACTAGATAACCCCAATCGGATTAGTGTTGAAATTGATCATGGATATCCGACGGACAGAAGAGGTACTATTGCCAGTACTTCCTTTATAGAACAATCTTCAGACTTTGTAAATGCATCGGTCAACAAGGAACCAAACGACAGAATCGAAAATCCAGTGAATGAGCAGGGGCATTCTTCTAGTGTATGGTCATCGAGACATTCACTTTCGCAAGAGGCAAATGAGGCCGTTTGCAGCCGTTCGTCAGTTGATCTTGACGGATTTGATGTGGTGGAGGATGCAAGTGTAGAATCCAATGTAAGACCTGTTGTGTCCAGTAGGGGACAGAATGGGATGGATGAGAGATCATCTCATGATGGTCCAGTATCTACATCTTCCTACATTTACTCTGATCACCTTGATATCCGTAGTAACTCCAGAATTTCATCTTCTGCTGCATCATCAAGCACCCGCTCTGCAGTAATGTCTGTGAATCCTAACAGAGATTTCTCAAGTGACAGTGGGAACGATGCCTTATCTCAGAATAGGAGGCCAGCTGATTTAAACGGGGGTCCTCCCTCTGGTCAGATCGGGGTTAATAATCGGAGTGAACAAAGACAACACTCGAGATCTGAGATCTGGGACATTGTGTTTGGCATCAATGAGAACCAACGGCAAACTAACTCGTGCCCGTTTGGGGTCCATCCTGGTGGTTCGTGCTCATGTGATTCATTATTGACTGGTGAAGAGTCTAGCATTCACCTAAGCATATCACGCATAGTGATGCTTGCTGAAGCTCTGTTTGAGGTGTTGGATGAGATGCAGCCCCGATCAGCCTACTTTTCATTACCATTAACTTCACATGTAGCACCCGAATCAGTTGTTGAATCATTCCCTCTCAGAGAATACATGAAGCCCAAGACAGCCGAGTCAACAGATGATGTACAACAGTGCTACATATGCCTCTCAGAGTACGAAGACGGGGACAAAATACGTCTTCTTCCGTGTCACCATGAGTATCACATGGCTTGTGTCGACAAATGGCTCAAAGAGATTCATGGGGTCTGTCCGCTTTGCCGAGGAGATGTGGCCGGTGGTGTGAGTGTGAATGAGGGTTCAGACTCCATGAACCCTTCTTCTTGA
Protein:  
MGTGTSRIGSEPPPVRVSRNNRSRSRARLSSLLVCGCSSSDVRDREQKEHFIDVRASSSKEIRPVVEITSERSRGTERLNSNTEAGSLSQISASTSTSRCVSVPHGLVGAEISKGEMYLKNYEELDNPNRISVEIDHGYPTDRRGTIASTSFIEQSSDFVNASVNKEPNDRIENPVNEQGHSSSVWSSRHSLSQEANEAVCSRSSVDLDGFDVVEDASVESNVRPVVSSRGQNGMDERSSHDGPVSTSSYIYSDHLDIRSNSRISSSAASSSTRSAVMSVNPNRDFSSDSGNDALSQNRRPADLNGGPPSGQIGVNNRSEQRQHSRSEIWDIVFGINENQRQTNSCPFGVHPGGSCSCDSLLTGEESSIHLSISRIVMLAEALFEVLDEMQPRSAYFSLPLTSHVAPESVVESFPLREYMKPKTAESTDDVQQCYICLSEYEDGDKIRLLPCHHEYHMACVDKWLKEIHGVCPLCRGDVAGGVSVNEGSDSMNPSS